This short course gives biologists with little background in coding computer programs an introduction to Python 3. After completion of this course you should be able to code functional Python programs to use in your research. Emphasis is placed on topics that are relevant to bioinformatics. The course is presented as a series of annotated PowerPoint presentations. This course makes use of Python 3.6 and PyCharm Community Edition 2017.3.2.
Introduction to Python for Biologists V3_8.pdf
1. Data Structures (12 min).pptx
2. Variables Operators and Strings (31 min).pptx
3. Lists, Tuples, Sets and Dictionaries (44 min).pptx
4. Data Input and Output (60 min).pptx
5. Loops and Enumeration (64 min).pptx
6. Conditional statements (18 min).pptx
7. Functions, scope and recursion (54 min).pptx
8. Classes, OOP and iteration (45 min).pptx
9. Modules, numpy and ndarray (43 min).pptx
10.Exceptions (14 min).pptx
11.Debugging (16 min).pptx
Introduction to Bioinformatics
Introduction.pdf
Pairwise alignment.pdf
BLAST.pdf
Multiple Sequence Alignment.pdf
Hidden Markov Models.pdf
A slideset used at the workshop on the ChIP-seq technique: ChIP_seq Workshop 22 June 2016 final.pdf
HPC wiki
Introduction to Matplotlib.pdf
